CDS

Accession Number TCMCG015C48986
gbkey CDS
Protein Id XP_027080316.1
Location complement(join(40915649..40915813,40916950..40917072,40917153..40917267,40918193..40918291,40918367..40918419,40919189..40919345,40920676..40920734,40920836..40920903,40920981..40921124,40921703..40921766,40922487..40922537,40922620..40922762,40922844..40922983,40923685..40923770,40923856..40924001,40924076..40924148,40925300..40925375,40925792..40925899,40926135..40926181,40926863..40926908,40927453..40927565,40927651..40927686,40927796..40927999,40928917..40928988))
Gene LOC113703219
GeneID 113703219
Organism Coffea arabica

Protein

Length 795aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027224515.1
Definition DNA mismatch repair protein MSH4 isoform X1 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category L
Description MutS family domain IV
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K08740        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGAAGACCTAGAAGATGCCGGAGAGAAGTCAAGCTTCGTCGTCGGCCTCATCGAGAACAGAGCCAAGGAGGTTGGAGTGGCTGCTATTGACTTGAGGTCTGCTTCTCTGCATCTCTCTCAGTACATTGAGACAAGTAGCTCCTACCAGAATACAAAGACCATACTGCAGTTCTACGATCCTATGGTCATTATTGTTCCTCCAAATAAGCTGGCAGCTGATGGTATGGTTGGTATCTCAGAATTGGTTGATAAATTTTGCACATCAACAAGAAAGGTTATAGTGTCTCGAAGTTACTTTGATGACACCAGGGGGGCTGTGCTGGTAAAAAATTTAGCTGCCAAAGAACCATCTGCTCTTGGTTTGGATACCTACTACAAACAATATTATCTTTGCTTCGGTGCAGCTGCTGCGACTGTCAAATGGACTGAAGCAGAAAAGGGAGTGATCATCACAAACCACTCATTGTCGGTTACCTTTAATGGATCATTTGGTCACATGAATATTGACACGACTAGCGTCCAGAATTTGGAAATCATTGAGCCTCTGCAGTCCACCCTCTGTGGTACAAACAACAGAAAGAGAAGCTTGTTTCAGATGCTAAAGGCAACAAGAATAGTTGGAGGGACTAGACTTCTGCGAGCCAATCTTTTGCAGCCTCCGAAAGATATTGAAACTATCAATGCTCGACTTGATTGCCTGGATGAGCTTATGAGCAACGAGCAGCTGTTCTTTGGCTTGTCCCAGGCTCTTCGGAAGTTTCCCAAAGAGACAGATAGGGTCCTTTGCCACTTCTGCTTTAAGCCAAAGAAAGTTACTAATGGAGTGCTGGCCATTGACAATGCAAGAAAGAGTCAAATATTGATATCAAGTATTATCCTACTCAAAACAGCTCTTGATGCATTACCACTACTCTCGAAGGTCCTTAAGGATGCCAAGTGTTTTCTACTGACAAATATTTACAAGTCTGTTTGTGAGAATGAAAAATATGCTTCCATAAGGAAAAGAATTGGGGAGGTGATTGATGAAGATGTGCTTCATACCCGTGTTCCTTTTGTTGCACGAACACAGCAGTGTTTTGCTGTCAAGGCAGGAATTGATGGACTTCTGGATATTGCAAGGAGATCTTTCTGTGACACCAGTGAAGCAGCTATACACAACCTTGCAAACAAGTATCGTGAAGATTATAAGCTACCAAATCTGAAAATCCCTTTCAACAATCGACAAGGGTTTTACTTTAGCATTCCACAAAAGGACATCAACGGAAAACTTCCAAGCAAATTCATACAGGTCGTGAAGCATGGAAATAATATCCATTGTTCTACTTTGGAACTTGCTTCTTTGAATGTAAGGAACAAGTCTGCAGCTAAAGAATGCTATACAAGGACAGAGCTTTGCCTGGAAGAATTGATGGATGCCATACGTCAAGATGTATCTGTGCTTACCCTTCTTGCAGAGGTCTTATGCCTCTTGGATATGATAGTTAACTCATTTGCTAACATGATATCGACTAAGCCTGTTGATCAATATACTAGACCTCAATTTAGTTATGATGGCCCGCTAGCAATTGATAGTGGAAGGCACCCTATCCTAGAAAGCATCCATAATGAGTTCATTCCTAACAATATCTTCCTTTCTGAAGCATCAAACATGGTAATTGTTATGGGCCCAAACATGAGCGGAAAGAGTACATACCTTCAACAAATTTGTTTGATAATAATCCTCGCGCAAATTGGTTGCTACATCCCTGCCCGCTTTGCTACTGTGAGGATAGTTGATCGCATATTTACAAGGATGGGAACCATGGACAACCTTGAATCAAACTCTAGCACGTTTATGATGGAGATGAAAGAGACCGCCTTTATTATGCAGAATGTCTCCCCTAGGAGTCTGATTGTTATGGATGAACTGGGGAGAGCGACTTCTTCCAGTGATGGATTTGCAATTGCATGGAGCTGTTGTGAGCACCTGTTATCAGTGAAAGCGTATACCATATTTGCTACTCATATGGAGAACTTATCAGAACTTGCCACCATTTACCCAAACGTAAAAATTCTTCACTTTCATGTTGACATAAAAAACAACCGTATGGATTTCAAGTTTCAACTAAAAGATGGACCACGACATGTACCACATTATGGGCTGAAATTAGCAGGAGTAGCTGGATTACCTAGTTCAGTGATTGAAACTGCCAAAAGCATCACCGCAAAGATTACAGAGAAGGAAGTCAGAAGAATGAAAATAAATTCTCTACAATACAATGACATCCAAATGGTTTACCGCGTAGCTCAACGCTTGATGTGTTTGAAATATTCGAATCAAGATGAAGATTCAATCCGAGAAGCATTGCAAGGCCTCAAGGAGAGCATCCTCAATGGAAGCCTATAG
Protein:  
MEDLEDAGEKSSFVVGLIENRAKEVGVAAIDLRSASLHLSQYIETSSSYQNTKTILQFYDPMVIIVPPNKLAADGMVGISELVDKFCTSTRKVIVSRSYFDDTRGAVLVKNLAAKEPSALGLDTYYKQYYLCFGAAAATVKWTEAEKGVIITNHSLSVTFNGSFGHMNIDTTSVQNLEIIEPLQSTLCGTNNRKRSLFQMLKATRIVGGTRLLRANLLQPPKDIETINARLDCLDELMSNEQLFFGLSQALRKFPKETDRVLCHFCFKPKKVTNGVLAIDNARKSQILISSIILLKTALDALPLLSKVLKDAKCFLLTNIYKSVCENEKYASIRKRIGEVIDEDVLHTRVPFVARTQQCFAVKAGIDGLLDIARRSFCDTSEAAIHNLANKYREDYKLPNLKIPFNNRQGFYFSIPQKDINGKLPSKFIQVVKHGNNIHCSTLELASLNVRNKSAAKECYTRTELCLEELMDAIRQDVSVLTLLAEVLCLLDMIVNSFANMISTKPVDQYTRPQFSYDGPLAIDSGRHPILESIHNEFIPNNIFLSEASNMVIVMGPNMSGKSTYLQQICLIIILAQIGCYIPARFATVRIVDRIFTRMGTMDNLESNSSTFMMEMKETAFIMQNVSPRSLIVMDELGRATSSSDGFAIAWSCCEHLLSVKAYTIFATHMENLSELATIYPNVKILHFHVDIKNNRMDFKFQLKDGPRHVPHYGLKLAGVAGLPSSVIETAKSITAKITEKEVRRMKINSLQYNDIQMVYRVAQRLMCLKYSNQDEDSIREALQGLKESILNGSL